Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13176

Metabolite ID
P13176
Deionized mass
897.2922 Da
Average m/z
898.2961
Average RT
11.3825
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.528e-14
Glyma.08G300400 hypothetical protein AT2G02910:AT2G02910:transmembrane protein (DUF616) 3Chr08:41830891–41843406 (-)9.939e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.207e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)1.027e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.43e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.43e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.148e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.268e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.528e-14
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.002e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.899e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.875e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)1.222e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.649e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.649e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)9.032e-11
Glyma.08G031900 hypothetical protein AT4G29230:NAC075:NAC domain containing protein 75 1Chr08:2547941–2553643 (+)8.538e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)9.822e-13
Glyma.08G300000 hypothetical protein NA 1Chr08:41812728–41812868 (+)9.939e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.878e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.174e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.754e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)7.535e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)7.535e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)3.323e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.026e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.026e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.43e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.344e-15
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.94e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.953e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.812e-11
Glyma.16G137800 hypothetical protein NA 1Chr16:29480352–29487400 (-)9.908e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)4.32e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.359e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.358e-14
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)3.491e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)1.23e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.148e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.49e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.49e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.451e-13