Overview Annotation GWAS Evidence Associated genes

P12984

Metabolite ID
P12984
Deionized mass
259.0947 Da
Average m/z
260.1017
Average RT
11.3228
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G083400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 3Chr07:7685748–7694834 (-)3.828e-13
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 3Chr14:42298358–42306613 (-)4.84e-11
Glyma.16G189500 hypothetical protein NA 2Chr16:35202920–35206459 (-)1.91e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.617e-11
Glyma.14G171100 hypothetical protein NA 1Chr14:42357087–42363791 (-)4.84e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)6.861e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)6.861e-11
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)1.508e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)1.825e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)6.688e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)6.688e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)6.688e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)1.117e-11