Overview Annotation GWAS Evidence Associated genes

P12776

Metabolite ID
P12776
Deionized mass
432.1254 Da
Average m/z
433.1314
Average RT
11.2424
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
38
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

38 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G096800 hypothetical protein NA 2Chr03:28444337–28450997 (+)5.17e-11
Glyma.03G097500 hypothetical protein NA 2Chr03:28506621–28512058 (-)5.17e-11
Glyma.03G097700 hypothetical protein AT3G03570:AT3G03570:signal transducer, putative (DUF3550/UPF0682) 2Chr03:28541271–28552605 (+)8.819e-19
Glyma.06G307500 hypothetical protein NA 2Chr06:49621167–49623664 (+)1.184e-14
Glyma.06G318000 hypothetical protein AT4G25190:QWRF7:QWRF motif protein (DUF566) 2Chr06:50657942–50664474 (-)3.296e-12
Glyma.01G172400 hypothetical protein AT2G18230:PPa2:pyrophosphorylase 2 1Chr01:50956072–50959621 (-)1.359e-22
Glyma.03G061100 hypothetical protein NA 1Chr03:9083998–9088244 (+)3.964e-16
Glyma.03G068300 hypothetical protein NA 1Chr03:14178336–14179311 (+)3.964e-16
Glyma.03G068800 hypothetical protein AT2G37680:AT2G37680:glucose-induced degradation-like protein 1Chr03:14266254–14273808 (+)3.964e-16
Glyma.03G096400 hypothetical protein AT5G48385:AT5G48385:FRIGIDA-like protein 1Chr03:28359115–28365266 (+)5.17e-11
Glyma.03G097600 hypothetical protein NA 1Chr03:28531242–28535136 (+)5.17e-11
Glyma.03G098300 hypothetical protein NA 1Chr03:28599174–28601768 (-)5.17e-11
Glyma.03G098500 hypothetical protein NA 1Chr03:28616477–28619602 (-)7.72e-11
Glyma.03G099500 hypothetical protein NA 1Chr03:28759733–28768561 (+)8.33e-11
Glyma.03G101500 hypothetical protein NA 1Chr03:29197799–29198872 (+)3.76e-18
Glyma.03G101700 hypothetical protein AT2G37700:AT2G37700:Fatty acid hydroxylase superfamily 1Chr03:29240836–29255414 (+)3.761e-18
Glyma.03G102500 hypothetical protein AT1G50120:AT1G50120:immunoglobulin 1Chr03:29421943–29447601 (-)3.761e-18
Glyma.03G103500 hypothetical protein AT2G44640:AT2G44640:TRIGALACTOSYLDIACYLGLYCEROL-like protein 1Chr03:29754607–29760597 (+)6.208e-16
Glyma.03G105400 hypothetical protein AT2G44670:AT2G44670:senescence-associated family protein (DUF581) 1Chr03:30187959–30189612 (+)6.208e-16
Glyma.04G109500 hypothetical protein NA 1Chr04:11800500–11808533 (-)3.923e-15
Glyma.06G306800 hypothetical protein AT3G21810:AT3G21810:Zinc finger C-x8-C-x5-C-x3-H type family protein 1Chr06:49571095–49579917 (-)1.184e-14
Glyma.06G307200 hypothetical protein AT5G42570:AT5G42570:B-cell receptor-associated 31-like protein 1Chr06:49609833–49613825 (+)1.184e-14
Glyma.06G307900 hypothetical protein NA 1Chr06:49664901–49674729 (+)1.184e-14
Glyma.12G097700 hypothetical protein NA 1Chr12:8390539–8395322 (-)2.284e-22
Glyma.12G098700 hypothetical protein AT2G32415:AT2G32415:Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 1Chr12:8511561–8522153 (+)1.229e-11
Glyma.12G101700 hypothetical protein NA 1Chr12:8981011–8985722 (+)1.229e-11
Glyma.13G303100 hypothetical protein NA 1Chr13:40007032–40010308 (-)8.134e-14
Glyma.13G303800 hypothetical protein NA 1Chr13:40087141–40092605 (-)8.134e-14
Glyma.13G304500 hypothetical protein NA 1Chr13:40139731–40145370 (-)8.134e-14
Glyma.16G031800 hypothetical protein AT3G61520:AT3G61520:Pentatricopeptide repeat (PPR) superfamily protein__AT5G28460:AT5G28460:Pentatricopeptide repeat (P… 1Chr16:3017265–3019791 (+)8.531e-11
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)8.531e-11
Glyma.16G150700 FT2A protein FLOWERING LOCUS T NA 1Chr16:31109999–31114963 (+)8.66e-15
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)9.691e-12
Glyma.20G128600 hypothetical protein AT3G19450:ATCAD4:GroES-like zinc-binding alcohol dehydrogenase family protein 1Chr20:37015598–37017590 (+)2.18e-11
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)1.353e-11
Glyma.20G217800 hypothetical protein AT1G32850:UBP11:ubiquitin-specific protease 11__AT4G10590:UBP10:ubiquitin-specific protease 10 1Chr20:45369972–45380130 (+)1.353e-11
Glyma.20G220100 hypothetical protein NA 1Chr20:45545826–45547940 (-)1.359e-22
Glyma.20G222500 hypothetical protein NA 1Chr20:45713410–45720018 (+)1.83e-15