Overview Annotation GWAS Evidence Associated genes

P12662

Metabolite ID
P12662
Deionized mass
307.1766 Da
Average m/z
308.1821
Average RT
11.1954
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)1.337e-12
Glyma.06G312600 hypothetical protein NA 3Chr06:50110112–50120250 (+)4.272e-11
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)5.175e-11
Glyma.03G022200 hypothetical protein NA 1Chr03:2326204–2327764 (+)2.823e-13
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)2.662e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.183e-11
Glyma.06G312700 hypothetical protein NA 1Chr06:50123797–50127622 (+)4.384e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.057e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)1.52e-11