Overview Annotation GWAS Evidence Associated genes

P12628

Metabolite ID
P12628
Deionized mass
115.0621 Da
Average m/z
116.0698
Average RT
11.1832
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
31
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

31 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.943e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.753e-12
Glyma.03G008300 hypothetical protein AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 1Chr03:801855–806650 (-)2.271e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.861e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.322e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.013e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.545e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.432e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.518e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.518e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.518e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)1.166e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.347e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.328e-11
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)5.72e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.638e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.638e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)8.935e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.087e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.817e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.087e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.087e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)8.689e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.375e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)7.433e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)7.433e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.881e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.881e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)6.035e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.753e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.776e-11