Overview Annotation GWAS Evidence Associated genes

P12555

Metabolite ID
P12555
Deionized mass
217.0936 Da
Average m/z
218.1003
Average RT
11.1533
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G264500 hypothetical protein AT1G78570:RHM1:rhamnose biosynthesis 1__AT1G53500:MUM4:NAD-dependent epimerase/dehydratase family protein 2Chr13:36755174–36759150 (+)4.895e-11
Glyma.05G188800 hypothetical protein AT5G09810:ACT7:actin 7 1Chr05:37453030–37456246 (-)2.64e-13
Glyma.06G277500 hypothetical protein AT2G42600:PPC2:phosphoenolpyruvate carboxylase 2 1Chr06:46935641–46944254 (+)4.444e-11
Glyma.13G264600 hypothetical protein AT1G78580:TPS1:trehalose-6-phosphate synthase 1Chr13:36759779–36772020 (-)5.194e-11
Glyma.15G208700 hypothetical protein AT5G35180:AT5G35180:ENHANCED DISEASE RESISTANCE protein (DUF1336) 1Chr15:30555853–30604729 (+)2.242e-11
Glyma.15G215900 Similar to Myb-like DNA-binding domain, SHAQKYF class family protein, expressed AT5G04900:NOL:NYC1-like protein 1Chr15:35359923–35369132 (-)2.242e-11