Overview Annotation GWAS Evidence Associated genes

P12533

Metabolite ID
P12533
Deionized mass
130.0406 Da
Average m/z
131.0484
Average RT
11.1448
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 3Chr08:11525692–11536927 (+)7.25e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.24e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.24e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.03e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.38e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.732e-11
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)1.596e-11
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)1.595e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.003e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)3.24e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)5.481e-12