Overview Annotation GWAS Evidence Associated genes

P12531

Metabolite ID
P12531
Deionized mass
190.0433 Da
Average m/z
191.0517
Average RT
11.1445
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)3.56e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.722e-13
Glyma.09G232100 hypothetical protein NA 1Chr09:45540062–45542484 (-)2.212e-13
Glyma.09G232300 hypothetical protein AT4G25280:AT4G25280:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr09:45546303–45549900 (-)2.212e-13
Glyma.09G232700 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr09:45580332–45582285 (-)2.849e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)4.372e-13
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.661e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)7.03e-12
Glyma.11G154900 PRP3 NA 1Chr11:12643089–12645488 (+)7.986e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)1.218e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)8.774e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)3.451e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.785e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.801e-12
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)2.344e-11