Overview Annotation GWAS Evidence Associated genes

P12517

Metabolite ID
P12517
Deionized mass
153.0776 Da
Average m/z
154.0854
Average RT
11.1405
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G085400 hypothetical protein AT3G24560:RSY3:Adenine nucleotide alpha hydrolases-like superfamily protein 2Chr07:7870356–7876333 (-)9.315e-13
Glyma.07G085600 hypothetical protein NA 2Chr07:7891876–7896291 (-)9.315e-13
Glyma.07G085500 hypothetical protein AT5G19660:S1P:SITE-1 protease 1Chr07:7877189–7883386 (+)9.315e-13
Glyma.07G085900 hypothetical protein AT5G19540:AT5G19540:thermosome subunit gamma 1Chr07:7924353–7928899 (+)1.558e-11
Glyma.18G067700 hypothetical protein AT5G58970:UCP2:uncoupling protein 2 1Chr18:6275928–6282149 (-)7.076e-12