Overview Annotation GWAS Evidence Associated genes

P12354

Metabolite ID
P12354
Deionized mass
263.1131 Da
Average m/z
264.1210
Average RT
11.0732
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.298e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.885e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.613e-11
Glyma.11G237000 hypothetical protein AT5G10050:AT5G10050:NAD(P)-binding Rossmann-fold superfamily protein 1Chr11:33169449–33171449 (+)2.767e-11
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)9.697e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.246e-15