Overview Annotation GWAS Evidence Associated genes

P12272

Metabolite ID
P12272
Deionized mass
299.1821 Da
Average m/z
300.1887
Average RT
11.0433
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.264e-12
Glyma.01G018900 hypothetical protein NA 1Chr01:1814560–1817417 (-)1.674e-12
Glyma.01G019000 hypothetical protein AT5G46800:BOU:Mitochondrial substrate carrier family protein 1Chr01:1818232–1821908 (-)1.674e-12
Glyma.01G019100 hypothetical protein AT5G65685:AT5G65685:UDP-Glycosyltransferase superfamily protein 1Chr01:1826798–1836387 (-)1.674e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.482e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.75e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)3.626e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)9.401e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.637e-14
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.923e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.923e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.838e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.662e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)8.438e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.264e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.393e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.312e-11