Overview Annotation GWAS Evidence Associated genes

P12196

Metabolite ID
P12196
Deionized mass
338.0643 Da
Average m/z
339.0687
Average RT
11.0225
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G235800 hypothetical protein AT5G15300:AT5G15300:Pentatricopeptide repeat (PPR) superfamily protein 1Chr09:45843153–45844701 (+)1.027e-11
Glyma.18G005100 hypothetical protein AT1G67310:AT1G67310:Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain 1Chr18:394711–403747 (+)1.08e-14
Glyma.18G005400 hypothetical protein AT1G27340:LCR:Galactose oxidase/kelch repeat superfamily protein 1Chr18:409980–414945 (-)1.08e-14
Glyma.18G013000 hypothetical protein NA 1Chr18:920971–921610 (+)1.116e-14
Glyma.18G013200 hypothetical protein NA 1Chr18:929640–933069 (+)1.116e-14
Glyma.18G013300 hypothetical protein AT1G13030:AT1G13030:sphere organelles protein-like protein 1Chr18:933127–939495 (-)1.116e-14