Overview Annotation GWAS Evidence Associated genes

P12178

Metabolite ID
P12178
Deionized mass
423.1591 Da
Average m/z
424.1641
Average RT
11.0185
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.287e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.084e-11
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)4.671e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.334e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)9.694e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)9.694e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.572e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)4.05e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.179e-11