Overview Annotation GWAS Evidence Associated genes

P12175

Metabolite ID
P12175
Deionized mass
426.9943 Da
Average m/z
428.0023
Average RT
11.0177
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.375e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.375e-11
Glyma.07G093800 hypothetical protein NA 1Chr07:8755633–8760962 (+)6.21e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)3.438e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.01e-11
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)2.462e-11
Glyma.13G052100 hypothetical protein NA 1Chr13:14902730–14924713 (-)2.383e-11
Glyma.13G052800 hypothetical protein NA 1Chr13:15005141–15009623 (+)2.585e-12
Glyma.13G053300 hypothetical protein NA 1Chr13:15064460–15069264 (-)9.536e-11
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)8.076e-12
Glyma.18G268000 hypothetical protein NA 1Chr18:55205656–55213313 (-)1.929e-13
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 1Chr20:34184591–34191923 (+)8.578e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)1.864e-11