Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P12156

Metabolite ID
P12156
Deionized mass
178.0973 Da
Average m/z
179.1060
Average RT
11.0135
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 5Chr03:2202325–2234931 (+)1.369e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 4Chr03:2423540–2428634 (-)6.601e-13
Glyma.03G021000 hypothetical protein NA 3Chr03:2148298–2162954 (-)5.675e-11
Glyma.06G312600 hypothetical protein NA 3Chr06:50110112–50120250 (+)5.027e-11
Glyma.02G063200 hypothetical protein NA 2Chr02:5680261–5682907 (-)3.925e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.451e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.431e-11
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)9.064e-12
Glyma.02G063000 hypothetical protein AT4G37150:MES9:methyl esterase 9__AT2G23560:MES7:methyl esterase 7 1Chr02:5674394–5675971 (-)6.708e-11
Glyma.02G063100 hypothetical protein AT2G23560:MES7:methyl esterase 7 1Chr02:5675594–5678429 (-)6.708e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)4.006e-11
Glyma.03G020900 hypothetical protein AT3G18030:HAL3A:HAL3-like protein A 1Chr03:2143987–2147131 (-)5.675e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.859e-11
Glyma.03G022200 hypothetical protein NA 1Chr03:2326204–2327764 (+)1.799e-13
Glyma.03G022400 hypothetical protein NA 1Chr03:2334661–2335316 (+)9.633e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)8.56e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)5.742e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)1.049e-11
Glyma.03G145800 hypothetical protein AT5G06710:HAT14:homeobox leucine zipper protein 1Chr03:36122932–36125124 (+)9.399e-11
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 1Chr03:36127816–36131230 (-)9.399e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)8.307e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.83e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.023e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.023e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.021e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.403e-11
Glyma.06G312700 hypothetical protein NA 1Chr06:50123797–50127622 (+)1.833e-11
Glyma.06G313600 hypothetical protein AT5G13750:ZIFL1:zinc induced facilitator-like 1 1Chr06:50219160–50226659 (-)8.539e-11
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)2.444e-11
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)7.913e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.967e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.451e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.316e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.316e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.316e-13
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)2.791e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.634e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.437e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.79e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.431e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)3.285e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.668e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.668e-12