P12133
Metabolite ID
P12133
Deionized mass
857.2829 Da
Average m/z
858.2868
Average RT
11.0039
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
79
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
79 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 3.978e-12 | |
| Glyma.08G300400 | hypothetical protein | AT2G02910:AT2G02910:transmembrane protein (DUF616) | 3 | Chr08:41830891–41843406 (-) | 1.443e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 3 | Chr16:30652378–30659548 (+) | 7.614e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 8.365e-12 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 8.365e-12 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 7.427e-11 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 3.738e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 3.978e-12 | |
| Glyma.01G032400 | hypothetical protein | NA | 1 | Chr01:3404831–3411453 (+) | 1.519e-11 | |
| Glyma.01G034300 | hypothetical protein | NA | 1 | Chr01:3573149–3579461 (-) | 1.364e-11 | |
| Glyma.01G174300 | hypothetical protein | NA | 1 | Chr01:51115502–51120201 (+) | 7.953e-11 | |
| Glyma.01G174600 | hypothetical protein | AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) | 1 | Chr01:51138854–51141103 (+) | 7.953e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 4.127e-17 | |
| Glyma.04G116900 | hypothetical protein | NA | 1 | Chr04:13696275–13700803 (+) | 6.279e-11 | |
| Glyma.05G223100 | hypothetical protein | AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein | 1 | Chr05:40259388–40262641 (+) | 1.292e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.072e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 3.121e-11 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 6.086e-13 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.417e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.773e-11 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 2.12e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.796e-18 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.796e-18 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 7.753e-12 | |
| Glyma.06G260900 | hypothetical protein | NA | 1 | Chr06:44662225–44665728 (-) | 1.674e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 9.703e-11 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 2.784e-11 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 2.784e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 4.63e-13 | |
| Glyma.07G069400 | hypothetical protein | AT2G46020:BRM:transcription regulatory protein SNF2 | 1 | Chr07:6270176–6283087 (-) | 3.664e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.995e-11 | |
| Glyma.08G300000 | hypothetical protein | NA | 1 | Chr08:41812728–41812868 (+) | 1.443e-11 | |
| Glyma.08G338900 | hypothetical protein | NA | 1 | Chr08:45536950–45543029 (-) | 3.435e-11 | |
| Glyma.09G012200 | hypothetical protein | AT2G35760:AT2G35760:Uncharacterized protein family (UPF0497) | 1 | Chr09:937048–940244 (+) | 1.751e-12 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 1.159e-14 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 1.223e-13 | |
| Glyma.09G253800 | hypothetical protein | NA | 1 | Chr09:47356240–47357763 (-) | 7.826e-11 | |
| Glyma.09G253900 | hypothetical protein | NA | 1 | Chr09:47359742–47364806 (-) | 7.826e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 1.528e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.616e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 3.267e-12 | |
| Glyma.11G110300 | hypothetical protein | AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… | 1 | Chr11:8402144–8406496 (-) | 2.055e-11 | |
| Glyma.11G171200 | hypothetical protein | AT5G58610:AT5G58610:PHD finger transcription factor | 1 | Chr11:18475119–18484515 (+) | 3.611e-11 | |
| Glyma.11G171500 | hypothetical protein | NA | 1 | Chr11:18629660–18631015 (+) | 3.611e-11 | |
| Glyma.11G171800 | hypothetical protein | NA | 1 | Chr11:18663180–18666591 (-) | 3.611e-11 | |
| Glyma.11G172200 | hypothetical protein | AT1G07110:F2KP:fructose-2,6-bisphosphatase | 1 | Chr11:18702580–18708310 (+) | 3.611e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.828e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 3.828e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 3.664e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 3.664e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 8.365e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 8.313e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 7.427e-11 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 5.271e-11 | |
| Glyma.16G138800 | hypothetical protein | NA | 1 | Chr16:29609432–29615000 (+) | 8.509e-12 | |
| Glyma.16G138900 | hypothetical protein | NA | 1 | Chr16:29620531–29621995 (+) | 1.695e-12 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 6.684e-18 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 4.083e-15 | |
| Glyma.16G140600 | hypothetical protein | NA | 1 | Chr16:29836830–29839178 (+) | 4.147e-12 | |
| Glyma.16G142300 | hypothetical protein | AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein | 1 | Chr16:30086178–30091466 (-) | 1.877e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 9.514e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 4.013e-13 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 9.686e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 9.686e-12 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 3.738e-11 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 5.991e-12 | |
| Glyma.18G299700 | hypothetical protein | AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein | 1 | Chr18:57755837–57757150 (-) | 1.82e-11 | |
| Glyma.18G301600 | hypothetical protein | AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein | 1 | Chr18:57939468–57945328 (+) | 1.205e-12 | |
| Glyma.18G301900 | hypothetical protein | AT5G13190:GILP:GSH-induced LITAF domain protein | 1 | Chr18:57953323–57956369 (-) | 7.115e-14 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.132e-15 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.132e-15 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 4.169e-13 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 1.879e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 4.672e-12 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 6.932e-11 | |
| Glyma.20G099900 | hypothetical protein | AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) | 1 | Chr20:34312783–34318966 (+) | 9.924e-12 | |
| Glyma.20G101700 | hypothetical protein | AT5G08580:AT5G08580:Calcium-binding EF hand family protein | 1 | Chr20:34467936–34475476 (-) | 5.966e-11 | |
| Glyma.20G114400 | hypothetical protein | AT1G68585:AT1G68585:uncharacterized protein | 1 | Chr20:35614355–35616709 (-) | 6.158e-11 | |
| Glyma.20G120200 | hypothetical protein | NA | 1 | Chr20:36268998–36282456 (-) | 3.814e-12 |