Overview Annotation GWAS Evidence Associated genes

P12115

Metabolite ID
P12115
Deionized mass
345.1197 Da
Average m/z
346.1263
Average RT
10.9951
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G246100 hypothetical protein AT3G04810:NEK2:NIMA-related kinase 2 1Chr03:44322480–44329466 (+)1.11e-11
Glyma.03G247000 hypothetical protein AT5G28840:GME:GDP-D-mannose 3',5'-epimerase 1Chr03:44384142–44388319 (-)1.11e-11
Glyma.03G247300 hypothetical protein AT3G04740:SWP:RNA polymerase II transcription mediator 1Chr03:44401854–44411153 (-)1.11e-11
Glyma.03G247500 hypothetical protein NA 1Chr03:44429284–44430566 (+)1.11e-11
Glyma.03G247700 hypothetical protein NA 1Chr03:44445104–44447805 (-)9.439e-16
Glyma.03G248700 hypothetical protein NA 1Chr03:44499588–44502884 (-)1.642e-21
Glyma.03G249200 hypothetical protein AT1G54560:XIE:Myosin family protein with Dil domain-containing protein 1Chr03:44540832–44551676 (+)1.642e-21
Glyma.03G249800 hypothetical protein AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein 1Chr03:44588637–44595274 (+)9.804e-11