Overview Annotation GWAS Evidence Associated genes

P12084

Metabolite ID
P12084
Deionized mass
364.1264 Da
Average m/z
365.1345
Average RT
10.9806
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
142
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

142 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)3.839e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)2.811e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.553e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.369e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.184e-13
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)2.828e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.258e-13
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)3.14e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.674e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.539e-15
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)3.887e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.158e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.084e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.084e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)1.932e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)5.335e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.521e-12
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)7.235e-11
Glyma.02G294200 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 1Chr02:47256480–47263517 (+)1.618e-11
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)7.945e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.141e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)9.23e-14
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)3.346e-12
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)3.346e-12
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)2.885e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.622e-14
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.548e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.853e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.414e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.414e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.414e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.258e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.148e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.822e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.563e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.099e-20
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.152e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)6.307e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)6.307e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)6.307e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)9.263e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)1.002e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)1.002e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.015e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)6.992e-12
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)6.987e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.174e-11
Glyma.06G301000 hypothetical protein NA 1Chr06:49001317–49005605 (+)5.893e-11
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)8.393e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.219e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)6.338e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)6.338e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)6.045e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)2.82e-12
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.82e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.553e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.553e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.553e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.553e-12
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)7.201e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)8.629e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)3.02e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.02e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.355e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.122e-13
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)1.703e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.657e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.657e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.657e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.657e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.037e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)7.655e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)2.708e-13
Glyma.11G221000 RCA11 AT2G39730:RCA:rubisco activase 1Chr11:31621224–31624882 (-)2.171e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)2.422e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.761e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.761e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.121e-13
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.101e-11
Glyma.13G189700 hypothetical protein AT5G07050:UMAMIT9:nodulin MtN21 /EamA-like transporter family protein 1Chr13:30310606–30315849 (-)6.956e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)2.438e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.619e-14
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.246e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.246e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.184e-13
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)6.205e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)2.828e-11
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)7.531e-11
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)7.531e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.258e-13
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)6.772e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)8.58e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)8.58e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.244e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.566e-14
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.715e-14
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.227e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.479e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)3.671e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.349e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)7.144e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.396e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.203e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.158e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.509e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.313e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)5.782e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)5.327e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.352e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.046e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.872e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.247e-12
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)1.769e-12
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)1.769e-12
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)5.907e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.107e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.107e-12
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)6.092e-14
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)3.62e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)3.62e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)3.62e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.908e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)1.281e-16
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.115e-14
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)2.811e-12
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)3.492e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)5.593e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)2.159e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)9.426e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)8.813e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.315e-11
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 1Chr18:55259873–55265930 (-)2.714e-12
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)3.292e-12
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)8.791e-12
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)7.306e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.643e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.24e-12
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)6.596e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.398e-12
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)9.828e-11
Glyma.20G217800 hypothetical protein AT1G32850:UBP11:ubiquitin-specific protease 11__AT4G10590:UBP10:ubiquitin-specific protease 10 1Chr20:45369972–45380130 (+)9.828e-11
Glyma.20G218100 hypothetical protein AT1G32900:GBSS1:UDP-Glycosyltransferase superfamily protein 1Chr20:45387265–45391879 (-)9.828e-11