Overview Annotation GWAS Evidence Associated genes

P12013

Metabolite ID
P12013
Deionized mass
149.0666 Da
Average m/z
150.0751
Average RT
10.9541
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.183e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.878e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)5.388e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)6.33e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)6.33e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.84e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)4.547e-12
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)4.547e-12
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 1Chr18:48365045–48368299 (-)9.66e-11
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)9.549e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)8.029e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.355e-11