Overview Annotation GWAS Evidence Associated genes

P12011

Metabolite ID
P12011
Deionized mass
476.1511 Da
Average m/z
477.1575
Average RT
10.9535
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 6Chr16:36856833–36863994 (-)2.581e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.024e-12
Glyma.18G206000 hypothetical protein NA 2Chr18:48972350–48976819 (+)2.239e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.974e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)3.101e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)3.1e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.024e-12
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)7.791e-11
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)7.791e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)8.07e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.137e-15
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.136e-15
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)8.591e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.633e-13
Glyma.18G234900 hypothetical protein NA 1Chr18:52338841–52345036 (-)2.445e-11
Glyma.18G252200 hypothetical protein NA 1Chr18:53899264–53899758 (+)2.714e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.982e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.531e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.31e-12