P12008
Metabolite ID
P12008
Deionized mass
260.0516 Da
Average m/z
261.0585
Average RT
10.9530
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 4 | Chr06:49451501–49461369 (-) | 1.358e-14 | |
| Glyma.16G147900 | hypothetical protein | NA | 3 | Chr16:30864919–30872425 (+) | 1.43e-11 | |
| Glyma.06G305200 | hypothetical protein | AT3G21690:AT3G21690:MATE efflux family protein | 2 | Chr06:49420013–49426780 (-) | 3.146e-13 | |
| Glyma.06G305600 | hypothetical protein | NA | 2 | Chr06:49446542–49450635 (-) | 1.358e-14 | |
| Glyma.10G172400 | hypothetical protein | AT4G10570:UBP9:ubiquitin-specific protease 9__AT1G32850:UBP11:ubiquitin-specific protease 11 | 2 | Chr10:40592783–40603954 (-) | 2.264e-12 | |
| Glyma.05G122300 | hypothetical protein | AT3G60360:EDA14:embryo sac development arrest 14 | 1 | Chr05:31585853–31588967 (-) | 3.254e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 9.56e-13 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 2.007e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 5.719e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 2.44e-11 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 2.44e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 5.749e-14 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.044e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.044e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.044e-13 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 1.358e-14 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 9.262e-11 |
| Glyma.08G148500 | hypothetical protein | AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:11362991–11368184 (-) | 1.114e-11 | |
| Glyma.09G019300 | hypothetical protein | AT1G52520:FRS6:FAR1-related sequence 6 | 1 | Chr09:1514278–1517148 (+) | 1.123e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 9.073e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 8.529e-11 | |
| Glyma.10G172600 | hypothetical protein | AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein | 1 | Chr10:40628401–40633140 (-) | 5.362e-17 | |
| Glyma.11G070700 | hypothetical protein | NA | 1 | Chr11:5282926–5287258 (+) | 9.583e-11 | |
| Glyma.11G118200 | hypothetical protein | NA | 1 | Chr11:8979431–8983783 (+) | 7.579e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 6.619e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 6.619e-11 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 6.422e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 8.213e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 8.213e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 2.176e-11 | |
| Glyma.15G139000 | hypothetical protein | NA | 1 | Chr15:11314329–11317181 (-) | 8.536e-12 | |
| Glyma.15G140400 | hypothetical protein | NA | 1 | Chr15:11495189–11495691 (+) | 7.585e-11 | |
| Glyma.15G141100 | hypothetical protein | NA | 1 | Chr15:11554310–11555089 (+) | 3.778e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 6.171e-12 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 5.759e-11 | |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 1.063e-11 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 5.997e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 3.587e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 9.43e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 4.275e-11 |