Overview Annotation GWAS Evidence Associated genes

P11886

Metabolite ID
P11886
Deionized mass
480.1660 Da
Average m/z
481.1782
Average RT
10.9124
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.609e-11
Glyma.18G106600 hypothetical protein NA 3Chr18:11947553–11951868 (+)1.97e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.307e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)3.507e-11
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 1Chr08:8750828–8756629 (-)2.571e-12
Glyma.08G114600 hypothetical protein NA 1Chr08:8763388–8766206 (-)2.07e-13
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.206e-12
Glyma.08G140900 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr08:10760962–10769630 (-)2.056e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.086e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)7.304e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.048e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)1.235e-12
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)1.235e-12