Overview Annotation GWAS Evidence Associated genes

P11733

Metabolite ID
P11733
Deionized mass
462.1651 Da
Average m/z
463.1696
Average RT
10.8744
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 2Chr12:38789187–38797498 (+)3.127e-13
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 2Chr12:38813527–38816237 (-)6.694e-12
Glyma.16G161500 hypothetical protein NA 2Chr16:32076715–32092322 (-)3.967e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.113e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.592e-11
Glyma.12G227900 hypothetical protein AT4G22140:EBS:PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein 1Chr12:38782023–38786092 (+)2.031e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)9.227e-11
Glyma.19G189600 hypothetical protein AT2G36620:RPL24A:ribosomal protein L24 1Chr19:44744021–44746094 (+)7.851e-11