Overview Annotation GWAS Evidence Associated genes

P11686

Metabolite ID
P11686
Deionized mass
379.1588 Da
Average m/z
380.1627
Average RT
10.8624
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)5.31e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.923e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)9.015e-11
Glyma.09G161400 hypothetical protein NA 1Chr09:38569947–38575128 (+)6.547e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)1.19e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)3.429e-13
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)1.529e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.436e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.436e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.381e-16
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 1Chr12:3547790–3551313 (+)8.235e-11
Glyma.12G050200 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr12:3600553–3604637 (-)8.235e-11
Glyma.12G054500 hypothetical protein NA 1Chr12:3938604–3943724 (+)2.804e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.538e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.019e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.019e-12