Overview Annotation GWAS Evidence Associated genes

P11559

Metabolite ID
P11559
Deionized mass
134.0358 Da
Average m/z
135.0430
Average RT
10.8195
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G049000 hypothetical protein NA 2Chr02:4464177–4467693 (+)4.604e-11
Glyma.02G049800 hypothetical protein NA 2Chr02:4522510–4528329 (+)4.604e-11
Glyma.02G043200 hypothetical protein AT4G35730:AT4G35730:Regulator of Vps4 activity in the MVB pathway protein 1Chr02:4036980–4040318 (+)8.279e-14
Glyma.02G045600 hypothetical protein NA 1Chr02:4195911–4203265 (+)2.757e-17
Glyma.02G045900 hypothetical protein AT4G35930:FBS4:F-box family protein 1Chr02:4221436–4224148 (+)2.757e-17
Glyma.02G046100 hypothetical protein NA 1Chr02:4242678–4246278 (+)6.126e-11
Glyma.02G046200 hypothetical protein AT3G51280:AT3G51280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr02:4249191–4251536 (-)6.126e-11
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 1Chr02:4276605–4283705 (-)2.757e-17
Glyma.02G046900 hypothetical protein AT4G38630:RPN10:regulatory particle non-ATPase 10 1Chr02:4314354–4319916 (-)2.757e-17
Glyma.02G047800 hypothetical protein AT5G07090:AT5G07090:Ribosomal protein S4 (RPS4A) family protein 1Chr02:4396176–4398689 (-)2.757e-17
Glyma.02G049400 hypothetical protein AT2G18030:MSRA5:Peptide methionine sulfoxide reductase family protein 1Chr02:4490216–4495264 (+)4.604e-11
Glyma.02G049500 hypothetical protein AT2G18040:PIN1AT:peptidylprolyl cis/trans isomerase, NIMA-interacting 1 1Chr02:4496218–4498814 (+)4.604e-11
Glyma.02G049700 hypothetical protein NA 1Chr02:4511302–4519700 (-)4.604e-11
Glyma.08G351100 hypothetical protein AT5G48720:XRI1:x-ray induced transcript 1 1Chr08:46472912–46476858 (-)2.566e-11
Glyma.20G142800 hypothetical protein NA 1Chr20:38121661–38124824 (-)5.011e-11