Overview Annotation GWAS Evidence Associated genes

P11550

Metabolite ID
P11550
Deionized mass
595.2071 Da
Average m/z
596.2083
Average RT
10.8160
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.57e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.654e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)1.585e-12
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)5.475e-13
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)5.476e-13
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)5.476e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.97e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.499e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.149e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.913e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.149e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.149e-13