Overview Annotation GWAS Evidence Associated genes

P11480

Metabolite ID
P11480
Deionized mass
206.0564 Da
Average m/z
207.0633
Average RT
10.7963
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G010500 hypothetical protein AT5G14900:AT5G14900:helicase associated (HA2) domain-containing protein 2Chr02:996771–1000699 (-)5.467e-11
Glyma.19G126600 hypothetical protein NA 2Chr19:38519657–38524877 (-)1.01e-15
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 2Chr20:34868954–34885305 (-)1.482e-15
Glyma.02G013000 hypothetical protein NA 1Chr02:1169695–1173051 (-)5.467e-11
Glyma.02G015100 hypothetical protein NA 1Chr02:1326595–1327756 (+)5.468e-11
Glyma.02G253400 hypothetical protein NA 1Chr02:44070356–44074208 (-)1.054e-11
Glyma.02G253600 hypothetical protein AT3G11320:AT3G11320:Nucleotide-sugar transporter family protein 1Chr02:44080395–44084225 (+)1.054e-11
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 1Chr12:1445666–1452363 (-)3.316e-13
Glyma.12G023600 hypothetical protein NA 1Chr12:1733920–1735494 (-)5.21e-11
Glyma.13G031700 hypothetical protein NA 1Chr13:10255501–10258532 (-)6.242e-12
Glyma.13G032300 hypothetical protein AT4G19610:AT4G19610:nucleotide/nucleic acid binding protein__AT5G08695:AT5G08695:RNA-binding (RRM/RBD/RNP motifs) famil… 1Chr13:10349300–10360514 (-)6.242e-12
Glyma.19G118600 hypothetical protein NA 1Chr19:37604905–37606757 (-)1.142e-11
Glyma.19G118800 hypothetical protein AT4G03240:FH:frataxin-like protein 1Chr19:37643375–37647739 (-)6.462e-21
Glyma.19G118900 hypothetical protein NA 1Chr19:37651114–37657346 (+)6.462e-21
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)6.462e-21
Glyma.20G106200 hypothetical protein NA 1Chr20:34862155–34865242 (+)1.482e-15