Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11456

Metabolite ID
P11456
Deionized mass
114.0695 Da
Average m/z
115.0756
Average RT
10.7916
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)7.401e-13
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 2Chr05:41022747–41030067 (-)1.029e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 2Chr06:50586679–50589765 (+)5.789e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.039e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.557e-11
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)9.419e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.664e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)4.345e-13
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.14e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.168e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.568e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)4.986e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.029e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.029e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.029e-12
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 1Chr05:41087671–41089500 (+)3.488e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.616e-12
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)7.52e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)7.52e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)7.521e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)7.52e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)7.52e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)7.52e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)7.52e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)7.52e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)7.52e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)7.521e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)7.521e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.948e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.036e-14
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)2.56e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)7.89e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)7.89e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)7.648e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.296e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.635e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.635e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)9.719e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.522e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.859e-12
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)5.831e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)2.638e-11
Glyma.15G036000 hypothetical protein NA 1Chr15:2855429–2860689 (+)5.696e-12
Glyma.15G037300 hypothetical protein AT5G59430:TRP1:telomeric repeat binding protein 1 1Chr15:2940192–2946115 (-)6.92e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)6.811e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.717e-11