Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11309

Metabolite ID
P11309
Deionized mass
236.0713 Da
Average m/z
237.0766
Average RT
10.7468
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)1.089e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.25e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.785e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)7.56e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.101e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.055e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)6.052e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.117e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.107e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.186e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.564e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.603e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.854e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)2.028e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.234e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.155e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.991e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.923e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.923e-12
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)7.393e-11
Glyma.14G063600 hypothetical protein AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) 1Chr14:5163603–5167769 (+)6.186e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.908e-11
Glyma.15G024400 hypothetical protein AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:1962152–1963820 (+)2.086e-11
Glyma.15G024500 hypothetical protein AT3G13810:IDD11:indeterminate(ID)-domain 11 1Chr15:1970818–1978651 (-)2.995e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.78e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)1.248e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)5.281e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.15e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.377e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.184e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.858e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.729e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)5.709e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.477e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)5.477e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)4.469e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.408e-14
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.785e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)3.017e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.693e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.693e-14