Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11200

Metabolite ID
P11200
Deionized mass
298.1065 Da
Average m/z
299.1121
Average RT
10.7063
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G068800 hypothetical protein NA 2Chr07:6211775–6221107 (-)3.993e-11
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 2Chr18:11773374–11782733 (+)2.346e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.357e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)9.903e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)3.684e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.451e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.894e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.026e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.255e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.255e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.255e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.965e-13
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)8.101e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)1.016e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)4.571e-12
Glyma.08G182500 hypothetical protein NA 1Chr08:14639429–14643788 (+)2.37e-11
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 1Chr08:14724384–14726579 (+)6.564e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.474e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)3.526e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)7.687e-13
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)7.687e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.683e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.077e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.004e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.289e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.289e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.289e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.289e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.017e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.017e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.923e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.923e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.923e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.096e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.545e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.662e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.041e-11
Glyma.18G105900 hypothetical protein AT3G58790:GAUT15:galacturonosyltransferase 15 1Chr18:11816666–11825810 (-)1.229e-11
Glyma.18G106300 hypothetical protein NA 1Chr18:11900700–11905446 (-)2.346e-12
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)1.162e-14
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)5.19e-14
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)5.19e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.733e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.733e-11