Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11192

Metabolite ID
P11192
Deionized mass
254.1234 Da
Average m/z
255.1309
Average RT
10.7036
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)2.566e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.157e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.204e-15
Glyma.15G258300 hypothetical protein NA 2Chr15:48899412–48908116 (-)9.101e-12
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)6.665e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)6.665e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.82e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.802e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.642e-11
Glyma.03G244500 hypothetical protein AT3G05090:LRS1:Transducin/WD40 repeat-like superfamily protein 1Chr03:44195906–44205767 (+)1.692e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.405e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.006e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.302e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.172e-12
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)1.255e-12
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)1.255e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)8.168e-13
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.759e-14
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.229e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.071e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.071e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.96e-12
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)5.076e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)5.076e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)5.076e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)5.861e-11
Glyma.10G158800 hypothetical protein AT3G05050:AT3G05050:Protein kinase superfamily protein 1Chr10:39283048–39289660 (-)4.121e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.865e-12
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)4.788e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)9.855e-11
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)2.566e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)2.566e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)4.252e-11
Glyma.16G011700 hypothetical protein AT1G69500:CYP704B1:cytochrome P450, family 704, subfamily B, polypeptide 1 1Chr16:1006761–1009381 (+)9.349e-12
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)2.545e-13
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)2.545e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.763e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.763e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.041e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.807e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.14e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.14e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)1.331e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)5.536e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)7.157e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.043e-11