Overview Annotation GWAS Evidence Associated genes

P10999

Metabolite ID
P10999
Deionized mass
258.1047 Da
Average m/z
259.1092
Average RT
10.6278
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.703e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.506e-12
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)5.051e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)7.697e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.108e-11
Glyma.07G147400 hypothetical protein AT4G28010:AT4G28010:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr07:17758180–17760291 (-)1.001e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.245e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.487e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.245e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.245e-14
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.212e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.565e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.414e-14
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.631e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.631e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)5.985e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)3.641e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.418e-14
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.708e-13
Glyma.20G120600 hypothetical protein AT3G27610:AT3G27610:Nucleotidylyl transferase superfamily protein__AT2G01220:AT2G01220:Nucleotidylyl transferase superf… 1Chr20:36318179–36324285 (-)1.75e-12
Glyma.20G120700 hypothetical protein AT2G01210:AT2G01210:Leucine-rich repeat protein kinase family protein 1Chr20:36334640–36337533 (+)1.75e-12