Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10971

Metabolite ID
P10971
Deionized mass
353.1777 Da
Average m/z
354.1864
Average RT
10.6196
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.465e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.703e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)2.461e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.473e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.465e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.093e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.093e-13
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.081e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.674e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.165e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.178e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.245e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.245e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.245e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.839e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.857e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.376e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.015e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.015e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.18e-11
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)6.252e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.703e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.703e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.703e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.703e-13
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)4.191e-12
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)3.645e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.988e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.988e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.934e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.934e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.145e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.857e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.145e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.145e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.861e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)2.449e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)8.945e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.749e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.111e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.171e-11
Glyma.17G258200 GASA29 gibberellin-regulated protein 29 NA 1Chr17:41222782–41223797 (-)4.99e-12
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)1.625e-13
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.228e-12
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.189e-11
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 1Chr18:55259873–55265930 (-)3.797e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.396e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.396e-11