Overview Annotation GWAS Evidence Associated genes

P10559

Metabolite ID
P10559
Deionized mass
306.1597 Da
Average m/z
307.1657
Average RT
10.4856
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G122500 hypothetical protein AT4G15570:MAA3:P-loop containing nucleoside triphosphate hydrolases superfamily protein 3Chr05:31601369–31619977 (-)4.209e-22
Glyma.05G121700 EKN NA 2Chr05:31451833–31453842 (-)4.209e-22
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 2Chr05:31585853–31588967 (-)4.209e-22
Glyma.05G122400 BZIP9 bZIP transcription factor bZIP9 NA 2Chr05:31590593–31594522 (-)4.209e-22
Glyma.05G195500 hypothetical protein NA 2Chr05:37982441–37989601 (+)2.597e-13
Glyma.18G048300 hypothetical protein AT4G16330:AT4G16330:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2Chr18:4176092–4178877 (+)1.012e-28
Glyma.05G106200 hypothetical protein NA 1Chr05:28299700–28302497 (-)4.209e-22
Glyma.05G122700 hypothetical protein AT1G62260:MEF9:mitochondrial editing factor 9 1Chr05:31637949–31641257 (+)4.209e-22
Glyma.05G122900 hypothetical protein NA 1Chr05:31656340–31662035 (+)4.209e-22
Glyma.05G123100 hypothetical protein NA 1Chr05:31678561–31682030 (+)4.209e-22
Glyma.05G123200 hypothetical protein NA 1Chr05:31688836–31694458 (+)4.209e-22
Glyma.05G123400 hypothetical protein NA 1Chr05:31712533–31713735 (+)4.209e-22
Glyma.05G123500 hypothetical protein AT3G48750:CDC2:cell division control 2 1Chr05:31718748–31724784 (-)4.209e-22
Glyma.05G124000 pgip1 NA 1Chr05:31766562–31767866 (+)4.209e-22
Glyma.15G069300 hypothetical protein AT1G61215:BRD4:bromodomain 4 1Chr15:5280315–5285943 (-)4.209e-22
Glyma.18G048900 hypothetical protein NA 1Chr18:4203622–4221206 (-)1.012e-28
Glyma.18G049800 hypothetical protein NA 1Chr18:4286571–4289400 (+)1.012e-28
Glyma.18G073700 hypothetical protein AT5G56020:AT5G56020:Got1/Sft2-like vescicle transport protein family 1Chr18:7012070–7018788 (-)3.7e-14