Overview Annotation GWAS Evidence Associated genes

P10499

Metabolite ID
P10499
Deionized mass
654.1657 Da
Average m/z
655.1716
Average RT
10.4595
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.948e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)7.843e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)5.379e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.709e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5.626e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)8.938e-12
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.499e-14
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)6.117e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.948e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.948e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.948e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.948e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.549e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.428e-13
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)2.32e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)4.745e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)7.825e-11