Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10374

Metabolite ID
P10374
Deionized mass
901.2640 Da
Average m/z
902.2740
Average RT
10.4245
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.497e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)4.693e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.272e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.451e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.451e-13
Glyma.13G198600 hypothetical protein AT3G07940:AT3G07940:Calcium-dependent ARF-type GTPase activating protein family 2Chr13:31233913–31240731 (-)4.771e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.306e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.306e-11
Glyma.02G273700 hypothetical protein AT5G21040:FBX2:F-box protein 2 1Chr02:45704557–45706919 (+)4.941e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.398e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.19e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.784e-17
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.011e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.852e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)8.058e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)8.058e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.632e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)4.954e-12
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.203e-11
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)4.652e-12
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)4.652e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)4.161e-14
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 1Chr11:7249880–7254364 (-)3.73e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.524e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.525e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.267e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.267e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.136e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.136e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.272e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.994e-11
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)9.001e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.74e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.74e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.451e-13
Glyma.13G198800 hypothetical protein NA 1Chr13:31252110–31257733 (-)4.771e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)7.242e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.849e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.497e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.774e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.516e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.517e-14