Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10306

Metabolite ID
P10306
Deionized mass
331.1686 Da
Average m/z
332.1777
Average RT
10.4062
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)5.384e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)8.415e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)5.384e-11
Glyma.01G045600 hypothetical protein NA 1Chr01:5242432–5245038 (-)1.235e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.523e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.583e-11
Glyma.02G138300 hypothetical protein AT3G59710:AT3G59710:NAD(P)-binding Rossmann-fold superfamily protein 1Chr02:14314317–14317028 (-)4.469e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.715e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.715e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.715e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.069e-13
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)6.303e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)6.303e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)6.177e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)8.415e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)8.416e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.391e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)8.197e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)8.197e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)8.197e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.241e-13
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)7.759e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.768e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.768e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.57e-11