Overview Annotation GWAS Evidence Associated genes

P10257

Metabolite ID
P10257
Deionized mass
727.1993 Da
Average m/z
728.2050
Average RT
10.3952
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G059600 hypothetical protein NA 3Chr18:5283311–5291592 (+)5.959e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.225e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.009e-13
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)5.382e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.059e-11
Glyma.18G055300 PER1 peroxidase NA 1Chr18:4805286–4809267 (-)5.959e-12
Glyma.18G056300 hypothetical protein AT1G16870:AT1G16870:mitochondrial 28S ribosomal protein S29-like protein 1Chr18:4923367–4930055 (-)5.173e-12
Glyma.18G059000 hypothetical protein NA 1Chr18:5221254–5226837 (-)5.959e-12
Glyma.18G059100 hypothetical protein NA 1Chr18:5227760–5229525 (+)5.959e-12
Glyma.18G059200 hypothetical protein AT5G58530:AT5G58530:Glutaredoxin family protein 1Chr18:5233333–5238882 (+)5.959e-12
Glyma.18G059800 hypothetical protein AT2G30100:AT2G30100:pentatricopeptide (PPR) repeat-containing protein 1Chr18:5303044–5306448 (-)5.959e-12
Glyma.18G060700 hypothetical protein AT1G07120:AT1G07120:CHUP1-like protein 1Chr18:5471610–5474303 (-)5.959e-12
Glyma.18G060900 hypothetical protein AT2G30040:MAPKKK14:mitogen-activated protein kinase kinase kinase 14 1Chr18:5486854–5488508 (-)5.959e-12
Glyma.18G061100 AS1 asparagine synthetase 1 AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 1Chr18:5539339–5544439 (+)5.959e-12
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)4.857e-14