Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10194

Metabolite ID
P10194
Deionized mass
450.1823 Da
Average m/z
451.1892
Average RT
10.3786
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)7.403e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)2.821e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)1.963e-14
Glyma.06G205100 hypothetical protein NA 2Chr06:19392099–19394901 (+)6.272e-11
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)6.02e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)9.561e-12
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 2Chr10:40628401–40633140 (-)4.363e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.816e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.816e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)9.473e-13
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)3.551e-12
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.105e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)9.572e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)9.675e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.637e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.767e-15
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)2.402e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.238e-16
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)2.723e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.772e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.077e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.361e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.361e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.361e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.94e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.585e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.585e-14
Glyma.06G204200 hypothetical protein AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) 1Chr06:19170925–19173352 (+)1.391e-11
Glyma.06G205000 hypothetical protein AT5G60940:AT5G60940:Transducin/WD40 repeat-like superfamily protein 1Chr06:19370642–19375687 (-)6.272e-11
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)6.02e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)2.056e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)2.056e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)2.056e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)2.056e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)2.056e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)2.056e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)2.056e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)2.056e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)2.056e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)2.056e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)2.312e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)2.312e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)2.312e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)6.298e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.086e-14
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.098e-14
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.086e-14
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.086e-14
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.098e-14
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.824e-14
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.151e-12
Glyma.06G293600 hypothetical protein AT1G03650:AT1G03650:Acyl-CoA N-acyltransferases (NAT) superfamily protein 1Chr06:48251255–48252791 (+)4.102e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)9.921e-15
Glyma.07G033200 hypothetical protein AT1G52770:AT1G52770:Phototropic-responsive NPH3 family protein 1Chr07:2603812–2606511 (+)1.301e-11
Glyma.07G033500 hypothetical protein NA 1Chr07:2619614–2627010 (+)7.019e-12
Glyma.07G033700 hypothetical protein AT1G52820:AT1G52820:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr07:2636344–2637789 (+)4.578e-12
Glyma.07G034300 hypothetical protein NA 1Chr07:2701469–2717662 (-)1.597e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.629e-11
Glyma.08G295800 hypothetical protein NA 1Chr08:41100889–41103542 (-)6.924e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)2.088e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.5e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.5e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.5e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.5e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.922e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.175e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.175e-14
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)6.032e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.171e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.171e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.615e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.192e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.403e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.816e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.815e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.451e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.095e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.697e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.748e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.509e-11
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)4.236e-14