Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10141

Metabolite ID
P10141
Deionized mass
376.0740 Da
Average m/z
377.0807
Average RT
10.3675
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G208400 hypothetical protein NA 4Chr16:36789890–36801967 (-)1.897e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)4.277e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.014e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.014e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.641e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)7.642e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.365e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.184e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.894e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)5.612e-11
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)6.049e-12
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 1Chr07:817488–822276 (+)6.049e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)8.005e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)8.005e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.528e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.299e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.299e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.459e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.459e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.56e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.56e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.277e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.028e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.966e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.966e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.014e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.141e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.839e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.641e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.628e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.047e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.977e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)8.012e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)7.541e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.048e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.554e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)1.473e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.001e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.001e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.639e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)4.556e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.32e-15
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)1.524e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.972e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.972e-11
Glyma.20G009300 hypothetical protein NA 1Chr20:824176–827023 (+)5.35e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.496e-11