Overview Annotation GWAS Evidence Associated genes

P10005

Metabolite ID
P10005
Deionized mass
498.1858 Da
Average m/z
499.1887
Average RT
10.3275
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
2
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

2 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G172200 hypothetical protein AT1G29030:AT1G29030:Apoptosis inhibitory protein 5 (API5)__AT2G34040:AT2G34040:Apoptosis inhibitory protein 5 (API5) 1Chr13:28612286–28620789 (-)6.443e-12
Glyma.19G249500 hypothetical protein AT1G71260:ATWHY2:WHIRLY 2 1Chr19:49547385–49551367 (+)8.315e-13