Overview Annotation GWAS Evidence Associated genes

P09938

Metabolite ID
P09938
Deionized mass
405.1523 Da
Average m/z
406.1605
Average RT
10.3069
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G028000 hypothetical protein AT4G08870:ARGAH2:Arginase/deacetylase superfamily protein 1Chr03:3070089–3077358 (-)8.529e-12
Glyma.03G028400 hypothetical protein AT2G45260:AT2G45260:myosin-4 protein (DUF641) 1Chr03:3107378–3110786 (+)1.725e-16
Glyma.04G006300 hypothetical protein NA 1Chr04:505636–506386 (+)2.464e-11