Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09847

Metabolite ID
P09847
Deionized mass
263.0443 Da
Average m/z
264.0490
Average RT
10.2820
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)5.228e-18
Glyma.04G107400 hypothetical protein AT2G20510:TIM44-1:translocase inner membrane subunit 44-1__AT2G36070:TIM44-2:translocase inner membrane subunit 44-2 2Chr04:11276495–11288391 (+)9.953e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.747e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 2Chr18:51943730–51947645 (+)6.068e-13
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 1Chr01:4304713–4310259 (-)5.863e-12
Glyma.01G222700 hypothetical protein AT1G64060:RBOH F:respiratory burst oxidase protein F 1Chr01:55163018–55172994 (+)6.582e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)3.482e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.224e-14
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.069e-12
Glyma.04G107100 hypothetical protein AT1G22060:AT1G22060:sporulation-specific protein 1Chr04:11239281–11250948 (-)9.953e-11
Glyma.04G107300 hypothetical protein AT1G36310:AT1G36310:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:11253648–11256731 (+)9.953e-11
Glyma.04G110600 hypothetical protein NA 1Chr04:12199550–12200299 (-)9.953e-11
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr04:12206027–12222024 (-)9.953e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.63e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)4.851e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.103e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)4.285e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)4.038e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)4.038e-12
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)8.804e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.426e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.588e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.377e-15
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)4.125e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)8.539e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.866e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)8.597e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.159e-11
Glyma.11G228400 hypothetical protein AT2G40070:AT2G40070:flocculation FLO11-like protein 1Chr11:32375284–32381183 (-)2.82e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.177e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.177e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.15e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.15e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.763e-11
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)4.874e-13
Glyma.12G194000 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr12:35567230–35571578 (+)5.044e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.511e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)9.243e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.718e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.082e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.718e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.718e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.713e-13
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)4.991e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.496e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.318e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)9.111e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)8.079e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.079e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.995e-11
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 1Chr17:12027849–12029726 (+)1.524e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)5.348e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.867e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.867e-13
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)9.602e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.881e-11
Glyma.20G149900 hypothetical protein NA 1Chr20:38879682–38881629 (-)6.84e-11