Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09846

Metabolite ID
P09846
Deionized mass
323.0635 Da
Average m/z
324.0705
Average RT
10.2819
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)2.457e-15
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)4.864e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.291e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.807e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)5.389e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.79e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.699e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.708e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.249e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)7.176e-11
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)2.203e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.267e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)6.293e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.499e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.499e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.499e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.499e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.445e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.838e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.534e-14
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.024e-14
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.024e-14
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.024e-14
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.024e-14
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.485e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.485e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)2.929e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)8.652e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.253e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.784e-14
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)9.239e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.522e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.269e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.035e-14
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.868e-14
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)2.06e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)1.171e-13
Glyma.18G252000 hypothetical protein AT1G02100:SBI1:Leucine carboxyl methyltransferase 1Chr18:53874840–53885068 (-)2.304e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.714e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.247e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)1.592e-12
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)4.646e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)2.448e-14