Overview Annotation GWAS Evidence Associated genes

P09741

Metabolite ID
P09741
Deionized mass
495.2201 Da
Average m/z
496.2236
Average RT
10.2459
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G181100 hypothetical protein NA 19Chr16:34198761–34209007 (-)2.711e-12
Glyma.16G172800 hypothetical protein AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein 3Chr16:33359317–33362446 (+)7.395e-14
Glyma.16G173400 hypothetical protein AT5G52900:MAKR6:membrane-associated kinase regulator 3Chr16:33388036–33390085 (+)9.276e-13
Glyma.16G173600 hypothetical protein AT5G24030:SLAH3:SLAC1 homologue 3 3Chr16:33407719–33412908 (-)2.299e-12
Glyma.16G181000 hypothetical protein NA 2Chr16:34189551–34197531 (+)1.34e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)3.88e-11
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)8e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)8e-11
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)1.992e-13
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr04:46279239–46297477 (-)1.807e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.547e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)6.166e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.423e-14
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)4.2e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)4.2e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)4.771e-13
Glyma.16G173100 hypothetical protein AT5G52920:PKP-BETA1:plastidic pyruvate kinase beta subunit 1 1Chr16:33368628–33375202 (-)3.785e-11
Glyma.16G177700 hypothetical protein NA 1Chr16:33877620–33880324 (-)8.556e-11
Glyma.16G180400 hypothetical protein AT5G23950:AT5G23950:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr16:34093033–34094634 (+)3.28e-12
Glyma.16G180500 hypothetical protein AT5G23940:PEL3:HXXXD-type acyl-transferase family protein 1Chr16:34105756–34109617 (+)2.353e-14
Glyma.16G180600 hypothetical protein AT5G52430:AT5G52430:hydroxyproline-rich glycoprotein family protein 1Chr16:34129875–34134314 (+)1.48e-11
Glyma.16G180700 hypothetical protein AT1G02260:AT1G02260:Divalent ion symporter 1Chr16:34147998–34150710 (+)1.48e-11
Glyma.16G180900 hypothetical protein AT1G02260:AT1G02260:Divalent ion symporter 1Chr16:34177189–34181506 (+)5.471e-13
Glyma.16G181300 hypothetical protein NA 1Chr16:34225053–34233073 (-)2.711e-12
Glyma.16G182100 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr16:34290037–34295432 (-)1.34e-13
Glyma.16G212900 hypothetical protein NA 1Chr16:37111887–37116497 (+)8.916e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.177e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.177e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)2.81e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)3.88e-11