Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09335

Metabolite ID
P09335
Deionized mass
300.1199 Da
Average m/z
301.1247
Average RT
10.1113
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G068800 hypothetical protein NA 5Chr07:6211775–6221107 (-)3.633e-13
Glyma.07G068100 hypothetical protein NA 2Chr07:6135478–6137135 (+)2.838e-12
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 2Chr07:6169729–6172231 (+)2.041e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.308e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)6.821e-13
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)6.471e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.382e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)9.756e-14
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)8.856e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.396e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.846e-13
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)2.189e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)9.173e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)7.342e-12
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)2.371e-11
Glyma.07G068500 hypothetical protein AT3G54980:AT3G54980:Pentatricopeptide repeat (PPR) superfamily protein__AT2G39230:LOJ:LATERAL ORGAN JUNCTION 1Chr07:6184449–6187743 (-)4.78e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)2.371e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)1.636e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)2.371e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)8.641e-12
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)7.83e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.363e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.703e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.705e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.452e-14
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)7.146e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)7.146e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.011e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.928e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.011e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.011e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.018e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.1e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.401e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.891e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)4.166e-12
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)5.363e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.258e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)6.821e-13
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)6.555e-13
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)6.821e-13
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)3.4e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.517e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.914e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.832e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)6.11e-11