Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09182

Metabolite ID
P09182
Deionized mass
442.0290 Da
Average m/z
443.0379
Average RT
10.0561
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.033e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.436e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.659e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.745e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.699e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.158e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.006e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.068e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)9.288e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)9.288e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.985e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.53e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.53e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.53e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.346e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.776e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.032e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.033e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.436e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.436e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.436e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.436e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)4.796e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)4.796e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.217e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.664e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.272e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.908e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)5.981e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.919e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.783e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.784e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.441e-14
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.168e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.745e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)8.729e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.729e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.406e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.403e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.564e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.975e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.983e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.34e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.003e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)3.079e-11
Glyma.20G123100 hypothetical protein AT2G01110:APG2:Sec-independent periplasmic protein translocase 1Chr20:36592639–36595961 (+)7.917e-11