Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08918

Metabolite ID
P08918
Deionized mass
188.0676 Da
Average m/z
189.0742
Average RT
9.9598
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G276800 hypothetical protein AT1G68890:PHYLLO:2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein 5Chr15:51600225–51651653 (-)1.636e-12
Glyma.15G271800 hypothetical protein AT3G52140:NOXY38:tetratricopeptide repeat (TPR)-containing protein 4Chr15:50891554–50910117 (+)1.182e-11
Glyma.15G273400 hypothetical protein NA 3Chr15:51080478–51083012 (-)1.182e-11
Glyma.15G276700 hypothetical protein AT5G13720:AT5G13720:Uncharacterized protein family (UPF0114) 3Chr15:51578950–51593999 (+)1.636e-12
Glyma.05G039900 hypothetical protein NA 2Chr05:3540909–3545019 (-)4.189e-21
Glyma.15G268400 hypothetical protein AT2G31955:CNX2:cofactor of nitrate reductase and xanthine dehydrogenase 2 2Chr15:50486694–50492385 (-)4.189e-21
Glyma.15G268500 hypothetical protein AT2G44350:ATCS:Citrate synthase family protein 2Chr15:50490711–50502498 (+)4.189e-21
Glyma.15G274500 hypothetical protein NA 2Chr15:51235879–51244293 (-)1.636e-12
Glyma.15G275400 hypothetical protein AT3G07970:QRT2:Pectin lyase-like superfamily protein 2Chr15:51403963–51408843 (-)1.636e-12
Glyma.15G275900 hypothetical protein AT3G08010:ATAB2:RNA binding protein 2Chr15:51486036–51491942 (+)1.636e-12
Glyma.20G177500 hypothetical protein AT5G63220:AT5G63220:golgi-to-ER traffic-like protein 2Chr20:41470287–41483978 (+)1.389e-14
Glyma.01G219400 hypothetical protein NA 1Chr01:54898589–54899940 (+)3.539e-14
Glyma.01G219600 hypothetical protein AT1G63470:AT1G63470:AT hook motif DNA-binding family protein 1Chr01:54903061–54907533 (-)3.539e-14
Glyma.03G220400 hypothetical protein NA 1Chr03:42351583–42352651 (-)2.419e-11
Glyma.03G220500 hypothetical protein AT4G02010:AT4G02010:Protein kinase superfamily protein 1Chr03:42352989–42360802 (-)2.419e-11
Glyma.05G181700 hypothetical protein AT4G39690:AT4G39690:MICOS complex subunit 1Chr05:36967490–36973970 (-)1.306e-11
Glyma.05G184100 hypothetical protein AT1G74050:AT1G74050:Ribosomal protein L6 family protein__AT1G18540:AT1G18540:Ribosomal protein L6 family protein 1Chr05:37121432–37123006 (+)1.306e-11
Glyma.11G154800 hypothetical protein AT3G54460:AT3G54460:SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein 1Chr11:12631557–12640449 (+)1.11e-11
Glyma.13G187700 hypothetical protein NA 1Chr13:30149058–30152110 (-)4.189e-21
Glyma.13G219000 hypothetical protein AT1G30130:AT1G30130:DUF1365 family protein 1Chr13:33222996–33227886 (+)2.448e-12
Glyma.15G267700 hypothetical protein AT3G60070:AT3G60070:Major facilitator superfamily protein 1Chr15:50399012–50406016 (-)4.968e-14
Glyma.15G267800 hypothetical protein NA 1Chr15:50415523–50417275 (-)4.968e-14
Glyma.15G268100 hypothetical protein NA 1Chr15:50445469–50448268 (+)4.189e-21
Glyma.15G268200 hypothetical protein AT1G05575:AT1G05575:uncharacterized protein__AT2G31945:AT2G31945:uncharacterized protein 1Chr15:50451999–50453074 (+)4.189e-21
Glyma.15G270600 hypothetical protein NA 1Chr15:50776146–50777217 (+)4.189e-21
Glyma.15G271000 hypothetical protein NA 1Chr15:50823428–50827189 (+)1.53e-11
Glyma.15G271600 hypothetical protein AT3G07450:AT3G07450:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 1Chr15:50883512–50884818 (-)1.182e-11
Glyma.15G272100 hypothetical protein AT5G40410:AT5G40410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr15:50944579–50946729 (+)1.182e-11
Glyma.15G272500 hypothetical protein NA 1Chr15:50993941–50994141 (-)1.182e-11
Glyma.15G272600 hypothetical protein NA 1Chr15:51000250–51001037 (-)1.182e-11
Glyma.15G272800 hypothetical protein NA 1Chr15:51021936–51022369 (-)1.182e-11
Glyma.15G272900 hypothetical protein AT3G12640:AT3G12640:RNA binding (RRM/RBD/RNP motifs) family protein 1Chr15:51030895–51037797 (-)1.182e-11
Glyma.15G273100 hypothetical protein NA 1Chr15:51057301–51057606 (-)1.182e-11
Glyma.15G274600 FRD3a AT3G08040:FRD3:MATE efflux family protein 1Chr15:51258793–51268380 (+)1.636e-12
Glyma.15G274800 hypothetical protein NA 1Chr15:51291261–51295661 (-)1.636e-12
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)1.636e-12
Glyma.15G275200 hypothetical protein AT1G20030:AT1G20030:Pathosis-related thaumatin superfamily protein 1Chr15:51364671–51366385 (-)1.636e-12
Glyma.15G275800 hypothetical protein NA 1Chr15:51473359–51476124 (+)1.636e-12
Glyma.15G276100 hypothetical protein AT3G08030:AT3G08030:DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642) 1Chr15:51510448–51513137 (-)1.636e-12
Glyma.15G276300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 1Chr15:51541078–51546842 (+)1.636e-12
Glyma.15G276500 hypothetical protein AT5G13700:PAO1:polyamine oxidase 1 1Chr15:51564250–51573306 (+)1.636e-12
Glyma.16G034900 hypothetical protein NA 1Chr16:3273872–3276746 (+)7.392e-13
Glyma.19G021700 hypothetical protein AT3G55160:AT3G55160:thyroid adenoma-associated-like protein 1Chr19:2404294–2414947 (+)1.618e-13
Glyma.19G021800 hypothetical protein AT5G39840:AT5G39840:ATP-dependent RNA helicase 1Chr19:2415804–2420321 (-)2.663e-14