Overview Annotation GWAS Evidence Associated genes

P08904

Metabolite ID
P08904
Deionized mass
414.0829 Da
Average m/z
415.0893
Average RT
9.9574
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G068600 hypothetical protein NA 2Chr07:6192764–6197166 (+)9.57e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.73e-11
Glyma.07G067600 hypothetical protein NA 1Chr07:6091311–6093654 (-)4.934e-12
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)2.297e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)1.978e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)9.57e-13
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)3.282e-13
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)3.282e-13
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)9.57e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.73e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.73e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.73e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.73e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)1.313e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.132e-11