Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08818

Metabolite ID
P08818
Deionized mass
425.1609 Da
Average m/z
426.1670
Average RT
9.9349
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)1.9e-11
Glyma.20G099500 hypothetical protein AT3G12590:AT3G12590:uncharacterized protein 4Chr20:34275736–34292214 (-)2.118e-13
Glyma.20G051900 hypothetical protein AT5G21105:AT5G21105:Plant L-ascorbate oxidase 3Chr20:11769051–11777145 (-)3.656e-13
Glyma.20G053700 hypothetical protein NA 3Chr20:12341598–12348808 (+)3.09e-14
Glyma.20G057400 hypothetical protein NA 3Chr20:16684534–16688382 (+)6.132e-11
Glyma.20G013100 hypothetical protein NA 2Chr20:1134080–1135710 (-)3.552e-16
Glyma.20G052300 hypothetical protein AT2G28070:ABCG3:ABC-2 type transporter family protein 2Chr20:11822430–11825594 (+)6.132e-11
Glyma.20G053000 hypothetical protein NA 2Chr20:11983566–11990328 (-)3.09e-14
Glyma.20G053500 hypothetical protein AT2G27110:FRS3:FAR1-related sequence 3 2Chr20:12277793–12295586 (+)6.132e-11
Glyma.20G054000 hypothetical protein NA 2Chr20:12411805–12423973 (-)6.132e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 2Chr20:34467936–34475476 (-)7.903e-15
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.268e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.519e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.147e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.147e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.027e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.186e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.186e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.186e-12
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)4.421e-12
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.692e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.192e-11
Glyma.05G166900 hypothetical protein NA 1Chr05:35735957–35739484 (-)1.635e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.673e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.948e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.883e-17
Glyma.07G228300 hypothetical protein AT1G14030:LSMT-L:Rubisco methyltransferase family protein 1Chr07:40639692–40644331 (-)1.114e-11
Glyma.07G228500 hypothetical protein NA 1Chr07:40714910–40717140 (-)1.114e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)4.952e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.585e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.585e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.617e-11
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)3.003e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.384e-11
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)2.727e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.442e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.408e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.099e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)3.566e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.427e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.931e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.931e-11
Glyma.20G051800 hypothetical protein NA 1Chr20:11725161–11725963 (+)3.656e-13
Glyma.20G052100 hypothetical protein NA 1Chr20:11810672–11820336 (-)6.132e-11
Glyma.20G052200 hypothetical protein NA 1Chr20:11811362–11814457 (+)6.132e-11
Glyma.20G052400 hypothetical protein AT3G45100:SETH2:UDP-Glycosyltransferase superfamily protein 1Chr20:11830478–11832178 (+)6.132e-11
Glyma.20G053100 Early nodulin-like protein 20 AT2G27035:ENODL20:early nodulin-like protein 20 1Chr20:12015196–12015822 (-)6.46e-11
Glyma.20G053200 hypothetical protein AT5G21060:AT5G21060:Glyceraldehyde-3-phosphate dehydrogenase-like family protein 1Chr20:12030619–12040081 (-)6.46e-11
Glyma.20G053600 hypothetical protein NA 1Chr20:12302185–12302885 (+)6.132e-11
Glyma.20G054600 hypothetical protein NA 1Chr20:12810605–12834824 (-)6.132e-11
Glyma.20G055000 hypothetical protein NA 1Chr20:12916039–12918861 (-)6.132e-11
Glyma.20G055400 hypothetical protein NA 1Chr20:13199672–13205467 (+)3.09e-14
Glyma.20G056500 hypothetical protein AT1G35220:AT1G35220:FAM91 carboxy-terminus protein 1Chr20:14773334–14777681 (-)3.09e-14
Glyma.20G056600 hypothetical protein NA 1Chr20:14796073–14810087 (-)6.132e-11
Glyma.20G056800 hypothetical protein AT2G32970:AT2G32970:G1/S-specific cyclin-E protein 1Chr20:15720600–15729831 (-)3.09e-14
Glyma.20G056900 hypothetical protein AT2G05760:AT2G05760:Xanthine/uracil permease family protein 1Chr20:15861905–15876848 (-)6.132e-11
Glyma.20G057300 hypothetical protein NA 1Chr20:16424783–16426060 (-)3.089e-14
Glyma.20G057500 hypothetical protein NA 1Chr20:16724289–16728840 (+)3.09e-14
Glyma.20G057600 hypothetical protein NA 1Chr20:16868459–16881368 (+)6.132e-11
Glyma.20G058000 hypothetical protein AT1G76490:HMG1:hydroxy methylglutaryl CoA reductase 1 1Chr20:17037758–17043212 (-)3.09e-14
Glyma.20G059300 hypothetical protein NA 1Chr20:17987356–17987736 (-)3.09e-14
Glyma.20G059500 hypothetical protein NA 1Chr20:18063874–18068733 (-)3.656e-13
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)9.505e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.19e-13
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 1Chr20:34184591–34191923 (+)3.656e-13
Glyma.20G098700 hypothetical protein AT2G39490:AT2G39490:F-box family protein 1Chr20:34192396–34194345 (+)1.19e-13
Glyma.20G099600 hypothetical protein AT3G55400:OVA1:methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS) 1Chr20:34295547–34302938 (+)2.118e-13
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)1.9e-11
Glyma.20G105400 hypothetical protein AT2G17010:AT2G17010:Mechanosensitive ion channel family protein 1Chr20:34796301–34808587 (+)1.46e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.326e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.324e-13
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)3.628e-11